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Softberry Inc protcomp v. 9.0
Protcomp V. 9.0, supplied by Softberry Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/protcomp+v%2E+9%2E0/protcomp+9+0/pmc12222199-49-6-10
Average 90 stars, based on 1 article reviews
protcomp v. 9.0 - by Bioz Stars, 2026-10
90/100 stars

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Article Title: Host-Induced Gene Silencing of Effector AGLIP1 Enhanced Resistance of Rice to Rhizoctonia solani AG1-IA
Article Snippet: ProtComp v. 9.0 (http://linux1.softberry.com/) (Emanuelsson et al, 2000) was used to predict protein subcellular localizations, while the Big-PI Predictor (http://mendel.imp.ac.at/sat/gpi/ gpi_server.html) (Eisenhaber et al, 2004) was used to identify GPI modification sites.

Article Title: Identification and analysis of MAPK cascade gene families of Camellia oleifera and their roles in response to cold stress.
Article Snippet: The subcellular localization of the MAPK cascade genes was predicted using the online tool SoftBerry ProtComp v. 9.0 (http:// www. softb erry. com/ berry. phtml? topic= protc omppl & group= progr ams& subgr oup= proloc) [36].

Article Title: Genome-wide analysis of the SWEET gene family and its response to powdery mildew and leaf spot infection in the common oat ( Avena sativa L.)
Article Snippet: Subcellular localizations were predicted using ProtComp v. 9.0 ( http://www.softberry.com/ ) [ ].

Article Title: Genome-Wide Identification and Expression Profiling of Heavy Metal ATPase (HMA) Genes in Peanut: Potential Roles in Heavy Metal Transport.
Article Snippet: Subcellular localization of AhHMA proteins was predicted by ProtComp v. 9.0 (http://www.softberry.com/berry.phtml?topic=protcomppl&group=programs& subgroup=proloc, accessed on 20 October 2023).

Article Title: Genome-Wide Identification of the Ferric Chelate Reductase ( FRO ) Gene Family in Peanut and Its Diploid Progenitors: Structure, Evolution, and Expression Profiles
Article Snippet: Subcellular targeting sites for FRO proteins were predicted using ProtComp v. 9.0 ( http://www.softberry.com/berry.phtml?topic=protcomppl&group=programs&subgroup=proloc , accessed on 28 July 2023).

Article Title: Genome-wide identification and expression analysis of ferric reductase oxidase (FRO) genes in Gossypium spp. reveal their crucial role in iron homeostasis under abiotic and biotic stress.
Article Snippet: Ferric Reductase Oxidase (FRO) genes are pivotal in iron uptake and homeostasis in plants, yet they are not studied in cotton.. Here, we identify and analyze 65 FRO homologs (21 GhFRO, 21 GbFRO, 11 GaFRO, 12 GrFRO) across four Gossypium species (G. hirsutum, G. barbadense, G. arboreum, G. raimondii).. FRO exhibit conserved ferric reductase activity and conserved domain structures; Ferric_reduct (PF01794), FAD_binding_8 (PF08022), and NAD_binding_6 (PF08030) across species.

Article Title: Genome-wide analysis of the COMT gene family in Avena sativa : insights into lignin biosynthesis and disease defense mechanisms
Article Snippet: Subcellular localizations predictions were made using ProtComp v. 9.0 ( http://www.softberry.com/ ) ( ).

Article Title: Genome-wide analysis of the SWEET gene family and its response to powdery mildew and leaf spot infection in the common oat (Avena sativa L.).
Article Snippet: Subcellular localizations were predicted using ProtComp v. 9.0 (http://www.softberry.com/) [53].



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